Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888572.1_cds_XP_016443163.1_38347
CDS Infomation

[gene=LOC107768550] [db_xref=GeneID:107768550] [protein=tetratricopeptide repeat protein 7A-like] [protein_id=XP_016443163.1] [location=join(30641..30814,31548..31803,31901..33111,33726..33873,36814..37133)] [gbkey=CDS]
Sequence

ATGTCTGGAAACGAATCAGCAGAATTAGGGCAGGTTGATGTTGATCCATCAGCCAGGCAA
GTTTGTGCAAATGGGATTTGCATGCAAACAACCGTTGTTGAAGCAAAACTTGATGAAGGA
AATATTCAAGAGGCTGAATCTGCATTGCGTGATGGTTTATCCCTCAATTTTGAGGAAGCA
CGAGCTCTACTTGGAAGATTGGAATATCAAAGAGGAAATGTGGAAGGTGCTCTTAGGGTG
TTTGATGGTATTGATCTCCAATCAGCCATACAGAGAATGCAGCCTTCTGTTACTGAGAAA
CAGCCTTCTAAAAAGGGCCGCACTCGCAGCGTTGAGTCTGTGCCGGGCGTCTCACAGCAT
GCTGCTGGTCTGGTCCTCGAGGCCATATATTTGAAAGCAAAGTCCCTTCAGAAGCTTGGG
AGACTGACTGAGGCTGCTCGGGAGTGTCAAAGTGTGCTTGATGCTGTAGAGAAGATATTC
GATAATGGAATACCTGATGTACTTGTAGAGAATAAGCTGCAAGAAACCGTCAGCCATGCT
GTTGAGCTCCTTCCAGAACTATGGAAGCAAACTGGTTGCTATTCTGAAGCAATGACTGCC
TACCGCCGTGCCCTCTTAAGCCAATGGAATCTCGATAATGACTGCTGTGCAAGGATTCAA
AAAGCTTTTGCTGTGTTTTTGCTTTATAGTGGGGTTGAGGTATGCCCACCAAGCTTAGCT
GTGCAAATTGACGGTTCTTATGTACCTAGGAACAATCTGGAAGAAGCAATCTTGCTGCTT
ATGATTCTAATGAGAAAAGTTTACCTTGGTAAGATCAAATGGGACCCTTCAGTTTTAGAG
CACCTTACATTTGCTCTGTCTGTATGCAGTCAAACCTCTGTTTTAGCTAAGCAACTTGAA
GAGGTAATGCCAGGGGTACTTAACAGGATTGACCGATGGCGAGCTTTGGCTCTTTGTTAT
AGTGCGGCCGGACAGAACAAAACGTCCTTAAGTCTGCTGAGGAAGTCTCTGCATAAGGAT
GAAGAACCTGATGACATTCTCTCATTGTTGCTGGCCGCTAAAATTTGCTCTGAGGAGGTC
TTTCTTGCTGCTGAGGGAGTGAAGTATGCACAGAGGGCAATAACTAATGCACAGGGTTCA
AATGAACACTTGAAAGGTGTTGGTCTCCGCATGTTAGGTCTTTGTTTGGGGAAGCAGGCT
AAAGTTGCAACCTCTGACTTTGAGAGATCACGTCTTCAATCTGAGGCTTTGAAATCTTTA
GATGGTGCAATGGCTTTAGAGAACGAAAATTCAGATTTGATGTTTGAGTTAGGTGTTCAA
TATGCAGAGCACCGTAATCTGGATGCAGCTTTGGGCTATGCAAAAAAGTATCTTGATACA
ACAGGAGGATCTGCTCTAAGAGGTTGGAGACTGCTTGCTTTAGTTCTGTCTGCTCAACAA
CGCTATACAGAGGCTGAAGTAGTTACTGATGCGGCCTTAGAGGAGACTGTAAAGTGGGAT
CAAGGACCTCTGCTAAGAATGAAAGCTAAGCTAAAAATATCCCAGTCGCGGCACATGGAT
GCAGTTGAAACTTATCGTTATCTCCTTGCACTGGTTCAAGCTCAAAGGAAATCTTATGGA
CCATTCAGAAATGCACCTCAGGCGGAGGAAGATAACGTAAATGAATATGAAGTTTGGCAT
GGCCTGGCAAACTTGTACTCTAGCCTTTCACATTGGAAGGATGCAGAGACATGTTTGGAG
AAAGCTAGAGCTCTTATCGAGTATTCAGCAGACACTTTGCATACAGAAGGTGTGATGCTT
GAAAAACGGGGAGAAAATGACAAAGCGTTGGCTGCTTATGTAAATGCACTATTAGTAGAG
CCTAATCATGTGCAATGCAAGATCTTGCTTGGTGCTTTATTGTCTAAAATGGGGTCGAAG
ATGTTGCCGTTGGCAAGAGCATTATTCTCCGATGCATTGAAGATCGAACCTACCAATCGC
GTAGCTTGGTACCACTTGGGATTGGTTCACAGAGACGATGGACGGGTAGCTGATGCTGCT
GATTGTTTCCAGGCAGCTTCCATGCTTGAAGAGTCTGATCCCATTGAAAGTTTCAGTTCC
ATCATTTGA

Peptide Sequence

PEP ID

XP_016443163.1
PEP Infomation

PREDICTED: tetratricopeptide repeat protein 7A-like [Nicotiana tabacum]
Sequence

MSGNESAELGQVDVDPSARQVCANGICMQTTVVEAKLDEGNIQEAESALRDGLSLNFEEA
RALLGRLEYQRGNVEGALRVFDGIDLQSAIQRMQPSVTEKQPSKKGRTRSVESVPGVSQH
AAGLVLEAIYLKAKSLQKLGRLTEAARECQSVLDAVEKIFDNGIPDVLVENKLQETVSHA
VELLPELWKQTGCYSEAMTAYRRALLSQWNLDNDCCARIQKAFAVFLLYSGVEVCPPSLA
VQIDGSYVPRNNLEEAILLLMILMRKVYLGKIKWDPSVLEHLTFALSVCSQTSVLAKQLE
EVMPGVLNRIDRWRALALCYSAAGQNKTSLSLLRKSLHKDEEPDDILSLLLAAKICSEEV
FLAAEGVKYAQRAITNAQGSNEHLKGVGLRMLGLCLGKQAKVATSDFERSRLQSEALKSL
DGAMALENENSDLMFELGVQYAEHRNLDAALGYAKKYLDTTGGSALRGWRLLALVLSAQQ
RYTEAEVVTDAALEETVKWDQGPLLRMKAKLKISQSRHMDAVETYRYLLALVQAQRKSYG
PFRNAPQAEEDNVNEYEVWHGLANLYSSLSHWKDAETCLEKARALIEYSADTLHTEGVML
EKRGENDKALAAYVNALLVEPNHVQCKILLGALLSKMGSKMLPLARALFSDALKIEPTNR
VAWYHLGLVHRDDGRVADAADCFQAASMLEESDPIESFSSII

Transcript Sequence

Gene sequence data has not been registered.